PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC005063.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 290aa    MW: 32901.9 Da    PI: 5.3455
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC005063.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3642.3e-2099195194
                   EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                   f+k+l++sdv++++r++lpkk ae+h   ++++e++ + ++d++g  +W++k+++  +++s++yvl+ ++ +Fv  +gL++gDf++ +  ++ ++ +
  EcC005063.10  99 FQKELKNSDVSSLRRMILPKKAAEAHlpALESKEGIFINMYDLDGqHTWSFKYRFwpNNNSRMYVLE-NTGDFVTTHGLQVGDFIMVY--QDcQNHN 192
                   99**************************77777999******99989******9989999999***9.******************99..4434444 PP

                   .EE CS
            B3  92 lvv 94 
                   +v+
  EcC005063.10 193 YVI 195
                   555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.7E-2891207IPR015300DNA-binding pseudobarrel domain
CDDcd100172.40E-2697199No hitNo description
SuperFamilySSF1019361.55E-2297196IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.71499201IPR003340B3 DNA binding domain
SMARTSM010191.1E-1999201IPR003340B3 DNA binding domain
PfamPF023629.4E-1799195IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0015991Biological ProcessATP hydrolysis coupled proton transport
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0033180Cellular Componentproton-transporting V-type ATPase, V1 domain
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0015078Molecular Functionhydrogen ion transmembrane transporter activity
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MMMVVVDHDE DGGLKKKAGD NHNAGSLRDG PDLVAALAAF GAVRRRKRMA RLRRPHVSFL  60
TFPGVSASHV PDCPLLLQPR ARVSSPHSEF DPRSLSFLFQ KELKNSDVSS LRRMILPKKA  120
AEAHLPALES KEGIFINMYD LDGQHTWSFK YRFWPNNNSR MYVLENTGDF VTTHGLQVGD  180
FIMVYQDCQN HNYVIQAKKA SEEDVYTDIA KSTISDLPLQ DHDEMNNNIN SFEETYPTID  240
HDVEMSFVYD TSFSNDSPLD FLGGSMTNYA RISPPESFGT VENWCFDDFC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068643.10.0PREDICTED: B3 domain-containing transcription factor FUS3-like
SwissprotQ9LW311e-82FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A061EET51e-110A0A061EET5_THECC; AP2/B3-like transcriptional factor family protein isoform 1
STRINGPOPTR_0001s32990.11e-101(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM71382638
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.14e-80B3 family protein